All notes below as one technical report pdf ps Table of Contents pdf ps 1 1/4 Basics of Molecular Biology Michael Gates pdf ps LaTeX 2 1/6 Basics of Molecular Biology (continued) Tory McGrath pdf ps LaTeX 3 1/11 Introduction to Sequence Similarity Martin Tompa pdf ps 4 1/13 Alignment by Dynamic Programming Martin Tompa pdf ps 5 1/18 Local Alignment, and Gap Penalties Martin Tompa pdf ps 6 1/20 Multiple Sequence Alignment Martin Tompa pdf ps 7 1/25 Finding Instances of Known Sites Elisabeth Rosenthal pdf ps 8 1/27 Relative Entropy Anne-Louise Leutenegger pdf ps 9 2/1 Relative Entropy and Binding Energy Neil Spring pdf ps 10 2/8 Finding Instances of Unknown Sites Dylan Chivian pdf ps 11 2/10 Correlation of Positions in Sequences Tammy Williams pdf ps 12 2/15 Maximum Subsequence Problem Mathieu Blanchette pdf ps 13 2/17 Markov Chains Jonathan Schaefer pdf ps 14 2/22 Using Interpolated Context Models to Find Genes Gretta Bartels pdf ps 15 2/24 Start Codon Prediction Mingzhou Song pdf ps 16 2/29 RNA Secondary Structure Prediction Matthew Cary pdf ps 17 3/2 RNA Secondary Structure Prediction (continued) Don Patterson pdf ps 18 3/7 Speeding Up Internal Loop Computations
